Insertion junction: CLIP2.003066_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003066
Chromosome:chromosome 17
Location:4251356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729700 CGL133 (1 of 1) PTHR14374:SF0 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 11; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCAAAAGTGACATCGGGATCTTCACGTTTTGTTTCTCGCAGGTTAC
Internal bar code:CCGATCGGGATGGATCGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGCGTGTTGGAGGAC
Suggested primer 2:CTGTCTCCCCTCTCCCTCTC