Insertion junction: CLIP2.003067_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003067
Chromosome:chromosome 3
Location:6655352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195200 HLD1,CGL76 Conserved in the Green Lineage; (1 of 6) IPR000073//IPR000639//IPR029058 - Alpha/beta hydrolase fold-1 // Epoxide hydrolase-like // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTAACAATGGGCGTGCCAGGGACAGCGTTCCAGGAGATGGGATTGGGC
Internal bar code:TTGATAGAACTACGCTTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGTGCTTTTCCTCAAC
Suggested primer 2:CAGTCCTTGGACTCCACCAC