Insertion junction: CLIP2.003070_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003070
Chromosome:chromosome 11
Location:1221168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467689 PETC1,PETC (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC); Chloroplast cytochrome b6f Rieske iron-sulfur center subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTATTGCGTTAGTGCATTTGATGCAAATTAAGAGTCGATGCCTCTCG
Internal bar code:AAGTAAACGCTTAAGGTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTATCCTATCGCACCAA
Suggested primer 2:GTGGAGGAGATGACAAGGGC