Insertion junction: CLIP2.003073_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003073
Chromosome:chromosome 8
Location:851527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361250 (1 of 7) 2.4.1.255 - Protein O-GlcNAc transferase / OGTase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAACTGGGGGGAGTGGGCCGCGGAGAGTCTCTTTGCAGCGTGTGTGGA
Internal bar code:TGCCTCATTGTTGAGTGACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCCTTAGCCCTCTCCT
Suggested primer 2:GATTGTGGTGAGGTGGGAGG