Insertion junction: CLIP2.003076_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003076
Chromosome:chromosome 4
Location:3930293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231026 SRP43,cpSRP43 (1 of 1) K12271 - signal recognition particle 43 kDa protein (SRP43, CAO); 43 kDa subunit of chloroplast signal recognition particle intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGGGACGGGAAGAGCGGGCGGGAGGGGGAGCGTAAGCTGCGTGCAG
Internal bar code:CGGCGTGCGGTACACCGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AATCTTCGCTGAAGGCCCTC
Suggested primer 2:GGTTGTGCTGACGGTGTCTA