Insertion junction: CLIP2.003078_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003078
Chromosome:chromosome 14
Location:701723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612450 PRPL15 (1 of 1) PTHR12934//PTHR12934:SF11 - 50S RIBOSOMAL PROTEIN L15 // 50S RIBOSOMAL PROTEIN L15, CHLOROPLASTIC; Chloroplast ribosomal protein L15 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAAATACAAAGCCGATGTCTGGAGTCTGCATGCTGGCGTTAGATACCG
Internal bar code:CTTAGTTCATGTGGCAACCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCACAGTTGAACCCGTAG
Suggested primer 2:CAAAGCCCTGGTGAGTTTGC