Insertion junction: CLIP2.003089_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003089
Chromosome:chromosome 12
Location:6312925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536800 CGL52 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAATAGTCGGTGTCCAAGTCTGAAGGCAGAGGAGGAAAGGGAAGAAGG
Internal bar code:CCGGCTGGTACGGCCTCTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGGCAGTCAGTGTTAGT
Suggested primer 2:CTCCTCTCCCTCCTCTCACC