Insertion junction: CLIP2.003090_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003090
Chromosome:chromosome 3
Location:8557158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210961 (1 of 1) PTHR10174:SF127 - PHOSPHATIDYLINOSITOL TRANSFER PROTEIN PDR16-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATTGTGATTCCTCGACCCAGGGCGCACAGAGCCGAGAGCAGAGGATGG
Internal bar code:GGAAAGAAAGTGCGGAGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2403
LEAP-Seq percent confirming:91.8367
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACAGCCACGTGAACTTG
Suggested primer 2:AGGTACTCACGCGAGGTACT