Insertion junction: CLIP2.003095_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003095
Chromosome:chromosome 12
Location:2007574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510750 GEX6 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATACCATCCAGCGCCGCACAAAGGCAACATCATGCAGATTCCCCAGGT
Internal bar code:TGCATGTTACCTTATTGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2142
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAATAAAGTCGGCAGCG
Suggested primer 2:CAGAATATGGGCGGGCTAGG