Insertion junction: CLIP2.003096_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003096
Chromosome:chromosome 6
Location:2321645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267600 LCYE,LEC1,LCYE1 (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase; lycopene epsilon cyclase, chloroplast precursor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAAGCATTCGTAGAGCGTTGTTGGCTATTCCTGGCCACTCGCTGCAC
Internal bar code:GACAACCGCAAGTTCTTTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2002
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTTGATTCAGGGCCGCT
Suggested primer 2:GCTCCAAAGAGGTCAGCCAT