Insertion junction: CLIP2.003097_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003097
Chromosome:chromosome 3
Location:6745460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196350 (1 of 3) K09858 - SEC-C motif domain protein (K09858) 3'UTR
Cre03.g196400 EPC1 (1 of 1) K11322 - enhancer of polycomb-like protein (EPC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGGAGCGGCAAGAAACAGGCCCCGATGCAGGCCCTCGGGCGAGAAA
Internal bar code:CATTGAACGTTCCGCTGTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1653
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGAGGTGTAACGGCATG
Suggested primer 2:ACGTATAGTGGCAGACCCCT