Insertion junction: CLIP2.003099_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003099
Chromosome:chromosome 2
Location:6319325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGTGGAGGATGACGCCGAGGAGGAAGTGAGCGCAGTGGAGGTGCGAG
Internal bar code:GAGGGCCGAATGAGTCACATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1961
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTGGCATGCTCTGTA
Suggested primer 2:GTACGGTCGGGCGCTTAATA