Insertion junction: CLIP2.003104_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003104
Chromosome:chromosome 13
Location:1282279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570900 MSRA1 (1 of 2) PTHR10173:SF6 - PEPTIDE METHIONINE SULFOXIDE REDUCTASE; Peptide methionine-S-sulfoxide reductase, msrA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCACGAGTTGACGAGCAAGCGGGGTCACAGACAGCCTCAATCTTCGAA
Internal bar code:TATGGGTAAGAATACTGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGTGGGATTGGGACTG
Suggested primer 2:GGAAGTGGATGCAGAGCTGT