Insertion junction: CLIP2.003105_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003105
Chromosome:chromosome 6
Location:4014952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGACATGTTCCTGCAGGTACCGTGTGTAATCGCCGGCCTGGCACGCA
Internal bar code:TCTTTAGACTGGGTTTAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2225
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCCTCAATGCCCTCAAT
Suggested primer 2:CGGCTATGACCAAATGCGTG