Insertion junction: CLIP2.003112_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003112
Chromosome:chromosome 6
Location:3513811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278117 CPLD7 Conserved in the Plant Lineage and Diatoms; (1 of 98) IPR023214 - HAD-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTTCCTGGTGGACTGGGGGTACAACACCCCCGCCGAACGCGCCCGC
Internal bar code:TTCAGGTTTGGCTGCGCCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TACCATCAGCCTCATCCCCA
Suggested primer 2:ATCTTCCGACTCCTGCTCCT