Insertion junction: CLIP2.003126_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003126
Chromosome:chromosome 3
Location:620515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145507 (1 of 1) IPR004720 - Phosphotransferase system, sorbose subfamily IIB component intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGGACCCGGGAGTCGCGCCTTCTCGTTGACAGTGCTGCCACAGCCG
Internal bar code:TTAGTAGATCTCCGTGCCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTGTCCCTGAGCCGTTT
Suggested primer 2:AGCTCAATGGCCTTCTCCAC