Insertion junction: CLIP2.003129_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003129
Chromosome:chromosome 2
Location:4972394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110500 (1 of 10) IPR004087//IPR004088 - K Homology domain // K Homology domain, type 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCGGCACAGTGCCGTGCACGTGGCCGCCACCCCTGCATGCCTGCAC
Internal bar code:TAGGTGGTAGGACTCGATAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3701
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACCCAGGCACACAAAC
Suggested primer 2:TGTCGTCATATCGCGGACTG