Insertion junction: CLIP2.003131_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003131
Chromosome:chromosome 4
Location:3959126
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g231516 (1 of 1) PTHR23315//PTHR23315:SF84 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATCTGTACCATTGCTTCTGGCTACGCCCTCTTGTCTTATTTAACATG
Internal bar code:CGAAATTAAGAGAGAGAGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTCACTTGTGCGACACC
Suggested primer 2:GTGAACGGGAGAGACCTTGG