Insertion junction: CLIP2.003132_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003132
Chromosome:chromosome 2
Location:409078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075850 STK12,SNRK2A,SNRK2,STPK12,ARS11 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGACGCATCCGGTCGGACGTGACGCACCGGCCCCACACCTCACCAAC
Internal bar code:TCGTTTAGAAATCAGCCACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGTACCACGAACCCAGA
Suggested primer 2:TTCTTTCCACTCCGTCCTGC