Insertion junction: CLIP2.003134_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003134
Chromosome:chromosome 2
Location:3474928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGTGCAAACGAGCAAATGCCATAAGAAGAAGCATGTGTTCACTAGA
Internal bar code:CATTCGTAGTGTTGCTGTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAAGACCAGGGGCAAT
Suggested primer 2:GTCAAGCATACTGGCGCATG