Insertion junction: CLIP2.003138_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003138
Chromosome:chromosome 5
Location:71519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCCGAGATTCCCTGTCGCTAAAGGTTGGGCACAAGGACACGAAGAGG
Internal bar code:GATCCTTGGTGGATTTATGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTACCGTCATTGCAGCAG
Suggested primer 2:CATCCATGCCGACAATGCTG