Insertion junction: CLIP2.003148_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003148
Chromosome:chromosome 1
Location:2754196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016600 PSBS1 (1 of 2) K03542 - photosystem II 22kDa protein (psbS); chloroplast Photosystem II-associated 22 kDa protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTCTGTCGACCAAGGCTTTCGCCCAGCGCGGCGTCTCCGCCCGCAAG
Internal bar code:AGATTAAGATAATATCAATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2948
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTCCTTGGTGAAGCCGA
Suggested primer 2:TGCAGTCAGGAGTCCGTTTC