Insertion junction: CLIP2.003161_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003161
Chromosome:chromosome 16
Location:7850859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689087 RTN1 (1 of 1) PTHR10994//PTHR10994:SF71 - RETICULON // RETICULON-LIKE PROTEIN B3; related to reticulon intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGGTTAACGCAGGCGCGCAGGGGTTGTGAGCAGCCGTGGACAGCTC
Internal bar code:GGTGGAGTCAGGCGAATGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3654
LEAP-Seq percent confirming:83.0769
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACCCAAGACCTTTGCG
Suggested primer 2:CCGAAGCTATCATCAGCCGT