Insertion junction: CLIP2.003166_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003166
Chromosome:chromosome 6
Location:8304615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307150 AMB1,AMYB1 Beta-amylase 1; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTTCGTTAACCCGGGAGCAATGCAGCCTCCACAAAACCGCTGAATAC
Internal bar code:GAAATACGCGGTGGTGTTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3320
LEAP-Seq percent confirming:44.0678
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGTCGTCGTCTAGCGTC
Suggested primer 2:GCGTCGTACTACCGGCATTA