Insertion junction: CLIP2.003168_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003168
Chromosome:chromosome 11
Location:2337117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095133 (1 of 1) PTHR14194//PTHR14194:SF44 - NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCGCAACACCGGCCCTGGCCCGGTGGCTTCGGAGCGCGTTCACGCAA
Internal bar code:TAGTGCTAGGCTAAAGTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1564
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTGTGTTTGTGTCGAAC
Suggested primer 2:GGTGCTGCGTGTTTGTGATT