Insertion junction: CLIP2.003175_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003175
Chromosome:chromosome 10
Location:4686640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452100 PSBY,PSBY2,PSBY1 (1 of 1) K02723 - photosystem II PsbY protein (psbY); ycf32-related polyprotein of photosystem II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCCCATGAGCCTAGGAGTGCGGCTTCAGTGTGTACCGTTACTCTTGT
Internal bar code:ATGGAGATTTATGTGGTGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGCTGGGAATGGTGAC
Suggested primer 2:GACTTCGGGAGATGAGAGCG