Insertion junction: CLIP2.003178_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003178
Chromosome:chromosome 1
Location:4690860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCGTTCGCGGCTAGCACGTACTCTTCGGCAGTCCGCTTTTACTCCCA
Internal bar code:TGGCGAAATGATATTGAGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACCTGCACAAACTCG
Suggested primer 2:GACTCGGTAGCGCGTATTGA