Insertion junction: CLIP2.003179_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003179
Chromosome:chromosome 10
Location:2489395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435850 CPLD24 conserved expressed protein, perhaps chloroplast targetted; (1 of 23) IPR008927 - 6-phosphogluconate dehydrogenase C-terminal domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAACAGATGCGGTCTGCTTGCTCAACCACTTTCCATGATCTCCATGT
Internal bar code:ATAAGGGGTATGGTGACAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTCCTCACTTAACACCC
Suggested primer 2:TTCATCCAGAACGGCATGCT