Insertion junction: CLIP2.003183_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003183
Chromosome:chromosome 8
Location:3704442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380250 CP12 (1 of 2) PF02672 - CP12 domain (CP12); Calvin cycle protein CP12, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGACCACTGCCAGGCCGAGCGCCGCGTGATCTACTGTCTCCTTGATC
Internal bar code:AAGCTGAGACGATGTCTTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCACGGCATATAGGCA
Suggested primer 2:GCAACACCCTTGAGTCGAGA