Insertion junction: CLIP2.003185_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003185
Chromosome:chromosome 7
Location:4075007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340650 CGL149 Conserved in the Green Lineage; (1 of 1) PF09430 - Protein of unknown function (DUF2012) (DUF2012) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGCCCCTTCGCCCAAACTGGCGGACGCAGCACCATCCTGGTGTCAC
Internal bar code:AAAAGTGTGGCGGGGATAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCTGGTCCTTCATCAAG
Suggested primer 2:ATACCGTTGTGCCAGGAAGG