Insertion junction: CLIP2.003186_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003186
Chromosome:chromosome 12
Location:7676750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555100 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTTTCCGATGGGGTCCAAAGGGCGCGCTATTGTTCGCTATACCATAG
Internal bar code:CCGGAAGCGCGAGGGCGCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2625
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGTACACCTCTGACCC
Suggested primer 2:ACACTTCGTTGGAGCGTCAT