Insertion junction: CLIP2.003189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003189
Chromosome:chromosome 6
Location:5128180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283000 CGLD39 Conserved in the Green Lineage and Diatoms CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAGTGCCAGTGCCAGTGCCGTGCCAGCCTGCCGGCCCCTCACCGGCG
Internal bar code:TTGGAATACCACACTCCCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:744
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCATCACCGAACCTCA
Suggested primer 2:GGGAAGGAGTCGGAGGTAGT