Insertion junction: CLIP2.003192_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003192
Chromosome:chromosome 11
Location:1582242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468377 (1 of 1) K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) 5'UTR_intron
Cre11.g801259 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATGTAAACGTTTTACAAAAGAATAGGATGCGAAAAGGTCAGACAGC
Internal bar code:TCGGTCCTATTATAACTGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2916
LEAP-Seq percent confirming:37.2881
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTAGCTGCTACTCAGAG
Suggested primer 2:AGTGGGCGCTTCAACATGTA