Insertion junction: CLIP2.003195_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003195
Chromosome:chromosome 3
Location:3170206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165000 EFG10,LPA1 (1 of 1) K03596 - GTP-binding protein LepA (lepA); Translation elongation factor EFG/EF2, LepA-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGTGGTGCGCGTCGGGGCCGGGTGGCTGCCTTTCCTCGTGCCCCGTG
Internal bar code:AAACTGGCTTTGTTTATTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCACACACCTTGAACTG
Suggested primer 2:AAGGAATGGCGGGGTTACAG