Insertion junction: CLIP2.003196_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003196
Chromosome:chromosome 7
Location:1095553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320350 CDJ5 (1 of 3) PF00226//PF13370 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain of Ferredoxin I (Fer4_13); Chloroplast DnaJ-like protein 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCGGAGTAGAGTGCCGACCGGTCTCACGCGTGCTGTCGCCGCAACTG
Internal bar code:GTTAGGTCAAAGCACAGCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1648
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTCAACCAGGCAGCAG
Suggested primer 2:TGACGATGCTCCGTATGACG