Insertion junction: CLIP2.003197_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003197
Chromosome:chromosome 3
Location:4195852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGACCTGCGTACCGGTGCCGGCTGCGGGCGAAGACAAGGGCGCAA
Internal bar code:CTTTCGTTCAACTAACCTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTCTGTGCTGCAGTCAG
Suggested primer 2:TCAGGACACTGCGACTAGGA