Insertion junction: CLIP2.003200_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003200
Chromosome:chromosome 6
Location:8675305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310050 CPL13 Conserved in the Plant Lineage; (1 of 1) PTHR10794//PTHR10794:SF53 - ABHYDROLASE DOMAIN-CONTAINING PROTEIN // CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTTAGGCAATGTGCAAGTGCTGTGGATGCGGCTGTGCGCCGCCTAG
Internal bar code:GGTGTGGTTGTAGGACTAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3119
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGTCATGTGGTCCTCAG
Suggested primer 2:GCTGGTTATCCTGACGCGTA