Insertion junction: CLIP2.003212_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003212
Chromosome:chromosome 12
Location:1954936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511400 CYCR3,PPR4 PentatricoPeptide Repeat protein 4; (1 of 1) PTHR10177//PTHR24015 - CYCLINE // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCCAATGGGAGAAGGCGACGGAAGTGTTTGAGCAGATGACAGCGC
Internal bar code:AAGATACCCGACTCGATGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGATCTCCAGCAGCCA
Suggested primer 2:AAGGGCGTTCCAGTGGTATG