Insertion junction: CLIP2.003218_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003218
Chromosome:chromosome 8
Location:3535676
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g379200 CPLD18 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR33471//PTHR33471:SF5 - FAMILY NOT NAMED // EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTTCCGCTGCTCTGTGTTGCCCATTACGAGGCTTTCCTGTGCTGCCT
Internal bar code:TAGAGAGGGTTCTTTGCACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:3.44828
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACAGGAACACGCACAG
Suggested primer 2:GGAAAGTTCGTTTTGGCGCT