Insertion junction: CLIP2.003248_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003248
Chromosome:chromosome 8
Location:1579468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365550 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACCACCCAAGGCACGCGACAAGGAGGCCCCCAGTCCACCCACCGCT
Internal bar code:TGTTCGGAGTGGGAACCATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCGGCACAAGCTATAAA
Suggested primer 2:CTCGGGCGTAATCTTGCTGA