Insertion junction: CLIP2.003257_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003257
Chromosome:chromosome 8
Location:3006959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374950 (1 of 6) PF02582 - Uncharacterised ACR, YagE family COG1723 (DUF155) 3'UTR_intron
Cre08.g375000 DSP (1 of 1) PF09192 - Actin-fragmin kinase, catalytic (Act-Frag_cataly); Dual-Specificity Protein Phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGCACACGGCAAAACCAGAGCGTGGTGCTCCCAACCTGCCCTTGCAA
Internal bar code:TATTTGTAAACTCGGGGCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGGTGAGTGTGTGTGTA
Suggested primer 2:GGTGTAGGTGCGACCACTTG