Insertion junction: CLIP2.003263_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003263
Chromosome:chromosome 11
Location:2485384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095111 VSR1 Vacuolar Sorting Receptor; (1 of 1) PTHR22765//PTHR22765:SF56 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCATCACAGGCTCGGCCGGCACGTGTGGTTTGGCGCGCGCCCACTG
Internal bar code:GAGGGTTCAAGTATTCCAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:631
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTTCCACAGCAGGTAGT
Suggested primer 2:AACCCAAGTGTGCTAGACGG