Insertion junction: CLIP2.003264_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003264
Chromosome:chromosome 16
Location:3900643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689150 SQD3,GTR23 Sulfoquinovosyldiacylglycerol synthase; (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGCACGAGGCAAACGTCGCTCTGTTTGTGGAGCCCAGCCCCTTCTCG
Internal bar code:GGTAGGTAGCCTTGCACAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4577
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTCGATGGCATAGTCT
Suggested primer 2:CAGCGTGCCTGCCTTTTATC