Insertion junction: CLIP2.003267_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003267
Chromosome:chromosome 16
Location:261544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694400 TGD2,CGL57 Trigalactosyldiacylglycerol 2; (1 of 2) PF02470 - MlaD protein (MlaD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCAAGACAACGAGGCCAGTCTGAGTCTGATTGTGCATGAGCATCGGA
Internal bar code:GGCTTCAAGGCTTTTAAGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACATCACTCCGTCGCACAT
Suggested primer 2:CTCGGGGGTGTGTGTATACG