Insertion junction: CLIP2.003272_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003272
Chromosome:chromosome 6
Location:2654441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270400 GT90-6,GT90F6 GT90 family protein 6; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTTTCAAGCAAGCGGTATTACAGAAGACCTTATGGCAGACACGGTAG
Internal bar code:TCTCCTCCAGTATGCTGTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1807
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGTTGGCGAGACAGTGA
Suggested primer 2:ATGTTTGAGGGAGTCCGCTG