Insertion junction: CLIP2.003275_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003275
Chromosome:chromosome 7
Location:2611849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330200 PF17,RSP9 Radial Spoke Protein 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTGTAGCCGTGCAGTAAGGGGCAGCCGCACAGCAGGGTGCTGGCTG
Internal bar code:AATCGACGTAAAACCTTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3380
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTAAGGGCATGCTCAGC
Suggested primer 2:GACAAACAGCAGGGCAAAGG