Insertion junction: CLIP2.003284_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003284
Chromosome:chromosome 12
Location:4997218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525100 SMC6B (1 of 2) PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCGCCTGCAGACCAACCAGCATGGCAGCAAATGTTTAGGTGCAAAC
Internal bar code:TTCCTAGTATGGAGACGTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5782
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTGAGGATTCCATGCCG
Suggested primer 2:AGCAAATAGGCACTCGCACT