Insertion junction: CLIP2.003285_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003285
Chromosome:chromosome 7
Location:4694219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345050 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCGCGCCGCACCACCAGCACGTCAATTGTTTGTTTGCTCCTTGCATG
Internal bar code:GACCTAGAGCGGCTCGCTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCATGCTTGAGGTGGTG
Suggested primer 2:CAGCCCCTGTTGGATTCCAT