Insertion junction: CLIP2.003294_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003294
Chromosome:chromosome 16
Location:4603240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670950 CYC4 c-type cytochrome, chloroplast precursor; (1 of 1) PTHR34688//PTHR34688:SF1 - FAMILY NOT NAMED // CYTOCHROME C6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGGTATAGCGCCCTGCCTCACCTGCGCACTTGTTGGCGAAAAGCTC
Internal bar code:TAACTTTCAACGATCGCGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAAACGCTTGAAAGGCCA
Suggested primer 2:TCACCTCCTCATCGCTCAGA