Insertion junction: CLIP2.003295_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003295
Chromosome:chromosome 12
Location:2006059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510750 GEX6 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTACGTACATGCAAACGTAATCTTATGAGACAGAGCAAGCGATGCAG
Internal bar code:GGCCGCCCTGGTATTATGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2082
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTGAGCACTCATGTGG
Suggested primer 2:ACTGTTGTTCGTTTGCGTGG